Nomenclature classes handled by Name>Struct:
Natural products

Natural products include several classes of compounds that are commonly found in biological organisms. In most ways they are treated similarly to non-biological parent structures. They can be derivatized in a variety of ways (alcohols, acids, etc.) including with unsaturation (-ene, -yne), can have further substituents added to them (methyl-, phenyl- etc.), and so on. There is also a small set of prefixes that apply only to natural products, including homo-, nor-, seco-, and abeo-.

 

Please note: This page shows a collection of chemical names and the structures generated from those names by Name>Struct. These examples have been chosen to show the scope and flexibility of Name>Struct, and should not be taken as a list of preferred chemical names! Although some of these names do conform to published nomenclature recommendations, many others do not. In fact, some of these names are truly bad and in our opinion should not have been used. All of these names, however, have appeared in various published sources, and Name>Struct is designed to produce a reasonable chemical structure for any reasonable chemical name. 

Amino acids

L-Arginine

N-tert-Butoxycarbonyl-L-phenylalaninol

N-acetyl-L-leucyl-L-threonyl-Leucinamide

Boc-D-phenylalaninal

Potassium (R)-2-(4-hydroxyphenyl)-N-(3-methoxy-1-methyl-3-oxoprop-1-enyl)glycinate

para-iodo-D-phenylalanine hydroxamic acid

N2-[gamma-L-(+)-glutamyl]-4-carboxyphenylhydrazine

L-Citrulline 4-methylumbelliferylamide hydrobromide 

L-Ornithine, N2-[(1,1-dimethylethoxy)carbonyl]-N5-[imino[[(4-methylphenyl)sulfonyl]amino]methyl]-

Glycine, N,N'-[(3',6'-dihydroxy-3-oxospiro[isobenzofuran-1(3H),9'-[9H]xanthene]-2',7'-diyl)bis(methylene)]bis[N-(carboxymethyl)-

Carbohydrates

1,2,3,4,6-Penta-O-galloyl-beta-D-glucose

1-Amino-1,6-dideoxy-L-galactose 

2,3-O-Isopropylidene-alpha,beta-D-ribofuranose

1,3,4,6-Tetra-O-acetyl-2-azido-2-deoxy-Alpha-D-galactopyranose

(R)-2-(Acetylamino)-3-O-(1-carboxyethyl)-2-deoxy-beta-D-glucose 

1,2-O-Cyclohexylidene-alpha-D-glucofuranose

1,2-O-Isopropylideneglycerol

N-acetyl-alpha-D-mannopyranosamine-6-phosphate

1-[4-[[2-o-(6-deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranosyl]oxy]-2,6-dihydroxyphenyl]-3-(3-hydroxy-4-methoxyphenyl)-1-propanone

(-)-(4,6-O-benzylidene)phenyl-beta-D-glucopyranoside

(-)-2,3:4,6-Di-O-isopropylidene-Alpha-L-xylo-2-hexulofuranosonic Acid Monohydrate

3-Deoxy-D-glycero-D-galacto-2-nonulosonic Acid

1,2-O-Cyclohexylidene-alpha-D-xylopentodialdo-1,4-furanose

1,2:4,5-di-O-isopropylidene-beta-D-erythro-2,3-hexodiulo-2,6-pyranose

4-O-alpha-D-Glucopyranosyl-D-glucitol

beta-D-Glucopyranosiduronic acid, 8-hydroxy-9-oxo-9H-xanthen-2-yl

Erythraric acid

Nucleic acids

2'-deoxyadenosine triphosphate

P3-[1-(4,5-Dimethoxy-2-nitrophenyl)ethyl]adenosine-5'-triphosphate, trisodium salt

(+)-3',5'-O-(1,1,3,3-tetraisopropyl-1,3-disiloxanediyl)cytidine

3'-azido-3'-deoxythymidine beta-D-glucuronide sodium salt

Steroids

cholesterol

Cholestan-3-ol, 5,6-epoxy-, (3beta,5alpha,6alpha)-

13,17-Secoandrosta-1,4-dien-17-oic acid, 13-hydroxy-3-oxo-, lactone

17-Hydroxy-19-nor-17alpha-pregna-4,9,11-trien-20-yn-3-one

(3a,4a,8a,9b,11a,13a,14b,16b,17Z)-16-(Acetyloxy)-3,11-dihydroxy-29-nordammara-17(20),24-dien-21-oic acid

Pregna-5,16-diene-3beta-ol-20-one, acetate,20-oxime

Other natural products

12,13-Epoxytrichothec-9-ene-3,4,8,15-tetrol-4,15-diacetate-8-isovalerate

13-Isopropylpodocarpa-8(14),12-dien-15-oic acid

Cedr-8-enyl methyl ketone

 Prosta-5,13-diene-1-oic acid, 9,11,15-trihydroxy-, (5Z,9a,11a,13E,15S)-